che wei hsu cover photo

Che-Wei Hsu

Born and raised in Taichung, Taiwan, I earned my B.S. and M.S. from National Taiwan University. For my Ph.D. in Uwe Ohler’s lab (MDC-BIMSB, Berlin, Germany), I established a transatlantic collaboration with Philip Benfey’s group (Duke) and co-built a comprehensively annotated single-cell root transcriptomic atlas now widely used in root biology. As a postdoc in the Benfey lab, I advanced single-cell analysis and modeling for hormone treatment time courses, identifying key gene modules and linking signaling to cell-cycle progression. I also extended my work to crops, studying rice roots under mechanical stress. I then joined Sheng-Yang He’s lab (Duke) to apply single-cell approaches to plant–microbe–environment interactions. I am now in Trevor Nolan’s lab (Caltech), building a 3D spatial single-cell root atlas that fuses spatial and single-cell data to map morphological and transcriptomic dynamics across root development.

Education

Education is the comprehensive process of acquiring knowledge, developing skills, and shaping one’s intellectual, moral and social character to prepare for life and contribute to society

Humboldt University (Humboldt Universität zu Berlin)                                         2019 – 2022

Ph.D. in Developmental Biology and Bioinformatics

National Taiwan University                                                                                            2016 – 2018

M.S. in Agronomy, Crop Division

National Taiwan University                                                                                             2012 – 2016

B.S. in Biochemistry

10+ years of research

A long-term commitment to advancing plant systems and computational biology toward resilient agriculture

10+

Publications

10+

Conferences

10+

Paper reviews

6+

Mentees